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arXiv AI Papers

Reimagining Enterprise RAG for Multi-Agent Systems: A Knowledge Layer That Organizes Before It Retrieves

Enterprises are deploying agentic AI across the software development lifecycle, and they need the behavioral logic of the systems they act on, not stakeholder documentation. A seven-agent reverse-engineering pipeline recovered this logic, processing 241 repositories across 18 services into thousands of artifacts describing scope, journeys, rules and acceptance criteria. Recovery does not confer usability. Entities like offer, eligibility, and activation recur across services under a shared vocabulary, related in name but operationally distinct, so one end-to-end journey implicates over a thousand near-identical rules that must not be conflated. Flat vector retrieval fails, returning an identical rule from the wrong service at high similarity with no signal of error. Content-level ontology, the traditional remedy, did not exist, and relating every occurrence of recurring entities would have cost more than the engagement and not survived a release cycle. We place the ontology at the artifact level. In this machine-generated corpus, each artifact retains its producer, component, service, domain and type, provenance that disambiguates before content is read. We present a knowledge layer that organizes before retrieving: a self-describing catalog, a sparse metadata registry, and a navigation hypergraph defined over artifacts rather than extracted entities. Queries resolve to artifact identifiers that constrain vector search, so the competing rule from another service is absent rather than outranked, making disambiguation structural, not statistical. Built in under a week and admitting new services by convention, the layer serves SDLC agents, developers, quality engineers and analysts. It supported root-cause analysis and resolution of 100+ production defects with developer verification and attributed 35 release regression failures to specific rules and services.

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How Bayer Crop Science built an agentic decision engine on Amazon Bedrock AgentCore with AWS Unified Operations

Bayer Crop Science built the Agentic Decision Engine (ADE), a multi-agent platform on Amazon Bedrock AgentCore that lets breeders, analysts, and researchers ask natural language questions about their analytics platform. This post covers the ADE architecture, five design decisions, and how the team prepared it for production with AWS Unified Operations.

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arXiv AI Papers

HarnessMM: Recursive Self-Improvement for Harness Token Efficiency

Agent harnesses repeatedly invoke reasoning after tool feedback, even when an earlier call has already fixed the next action. We introduce HarnessMM (Harness Minus Minus), a method for improving harness token efficiency through guarded decision reuse and recursive self-improvement (RSI). RSI iteratively refines companion harness configurations from training feedback, with validation selecting the configuration for deployment. A controller at the model-tool boundary reuses resolved decisions to replace later reasoning callbacks while actor weights remain fixed. Executable Decision Graphs store exact actions, literal arguments, causal dependencies, and public guards. Guarded Decision Reuse activates these persistent decisions from observed receipts; Certified Callback Substitution executes them through the native interface and records removal of the registered slow callback. New semantic decisions, unsupported evidence, and selector abstention invoke the original actor again. The representation restricts what feedback may change, while complete-task measurements establish quality and cost. On HumanEval, HarnessMM preserves Codex success at 90.82\% while reducing Tokens/task (k) from 66.72 to 47.02 (29.54\% saving). For DeepSeek Harness, success rises from 71.43\% to 85.71\% while Tokens/task (k) fall from 96.28 to 11.62 (87.93\% saving). A separate MBPP ablation measures 26.91\% lower cost than single-use graphs and 19.52\% lower cost than retained callbacks. These results establish guarded decision reuse as a practical way to reduce repeated reasoning in existing harnesses.

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arXiv AI Papers

Frontier-OPD: Discovering the Edge of Agent Capability and Teaching Agents to Go Beyond

On-policy distillation aligns teacher feedback with a student's current behavior, yet acquiring useful supervision for multi-turn agents requires identifying both where guidance is needed and whether the student can sustain the interaction afterward. We introduce Frontier-OPD, which addresses this problem through the student's learning frontier: decision situations that remain challenging but admit useful autonomous continuation after brief teacher guidance. To operationalize this frontier, Frontier-OPD organizes on-policy experience into a shared-state trajectory graph, where trajectory-balanced aggregation of teacher-student disagreement identifies distinct intervention candidates while preserving the histories needed for replay. Short teacher bridges are then assessed by comparing agreement over the bridge and the ensuing student continuation with an equally long segment of the original trajectory, providing a behavioral proxy for guidance that the current student can build on. Accepted teacher responses augment ordinary distillation data, and fresh rollouts renew the frontier estimate as the policy changes. Experiments on ALFWorld, WebShop, and ScienceWorld report higher mean autonomous performance than the compared distillation baselines across the evaluated student scales and teacher configurations, with ablations indicating complementary effects of candidate selection and guidance filtering. In one ALFWorld timing setting, the additional collection cost is offset by a shorter time to a target success rate.

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arXiv AI Papers

Every Edge Needs a Quote: Building a Quote-Grounded Knowledge Graph of Healthcare Software Adoption with Language-Model Agents

Hospitals regularly buy software that clinicians and patients depend on. Because these purchases are costly, hard to reverse and can affect patient care, buyers look for evidence of which peer institutions already use a product and which systems it connects to. This evidence is public but scattered across vendor websites, press releases and third-party pages. Language-model agents can now collect it at low cost, but the correctness of the extracted claims is difficult to establish, and a wrongly listed customer can mislead buyers and misrepresent an organisation. We present a pipeline that builds a knowledge graph of customer and integration relations from the open web under one rule: every edge must be supported by a verbatim quote from its source page. Pages come from a deterministic crawl of each vendor's site and a budgeted ReAct agent that searches the rest of the web. A permissive extractor proposes relations with quotes, and a layered grounding stage decides which to keep, using a referent step that reads the whole page when a quote names only one side, deterministic checks, and a panel of five model calls voting on nine criteria. On 61 vendors, the pipeline reaches 0.94 precision and 0.71 recall against a page-level key covering the 6,428 candidate relations proposed by its extractor, whose verdicts were drafted by one model and re-checked with a second. Against the golden reference, the marketplace's own curated list, it scores lower, but 89% of the relations it keeps that the reference lacks are stated on a page. A confidence score built from the panel's votes keeps more correct relations than the fixed rule at the same precision, and reaches 0.90 precision at 0.90 recall. We also discuss how narrow, bounded model calls, string-matched evidence and voting address long-context degradation and run-to-run variance.

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arXiv AI Papers

What Transfers Across Protein Pockets? Experience Reuse in Molecular Optimization for Agentic Structure-Based Drug Design

LLM agents optimize a ligand in a protein pocket by editing it step by step and docking each edit. Recent agents first spend extra dockings probing the complex with controlled edits; guidance induced from these probes is reported to help more than the chemical knowledge the model already carries. The probes are then discarded with the instance that produced them, so the obvious next step is to keep them in an experience base, letting a new pocket inherit what earlier ones already paid for. Such a base is read through a key: the record properties under which past edits are pooled and a new one is looked up. Using the full log of one such run over the CrossDocked2020 test-set pockets, we ask whether its keys recur on a pocket the base has never seen and still separate improving from worsening edits. {Using} the contacts at the site being edited, the action, and the round as {a} key, the base separates them sharply. Within our analysis, this separation is largely explained by how much the edit changed the molecule's size, the action, and the round, none of which describes the target. That is not because the target is irrelevant: naming it outright separates them several times more sharply. For a pocket absent from the base, transfer must rely on a description rather than its identity. Among the exact-match descriptions we evaluate, the more specific ones rarely recur, whereas the coarser ones provide little separation; the signals that do transfer primarily describe the edit and the molecule it produced rather than the target. Under the representations and lookup scheme studied here, an experience base may be more useful for prioritizing an agent's own proposals for docking than for directly prescribing what to build.

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arXiv AI Papers

PHYRD: A Living Benchmark for Reproducing and Extending Theoretical Physics Research

Large language models and agents have shown significant power in advanced physical research. In this paper, We introduce PHYRD, a living benchmark for theoretical-physics reasoning with 63 Reproduce and 43 Discover problems. Reproduce tests derivation of published results; Discover tests consequences of modified theoretical conditions. FormulaForest constructs the tasks with reference solutions and subquestion-level rubrics. Across five models, whole-problem accuracy ranges from 49.21% to 68.25% on Reproduce and from 18.60% to 74.42% on closed-book Discover. With tools, four models complete more Discover problems, but conceptual errors and missing arguments persist. Besides, our experimental results demonstrate the value of FormulaForest as synthetic data. On FrontierScience, a benchmark developed by OpenAI, it raises the accuracy of a Qwen-35B-A3B model from 61% to 72%.

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arXiv AI Papers

Tool-Calling LLM Agents Under Realistic MCP Faults: Scale Does Not Purchase Fault Tolerance

LLM agents increasingly rely on external tools exposed via the Model Context Protocol (MCP), yet current benchmarks assume tools respond correctly and on time, leaving agent resilience to realistic tool failures untested. We introduce MCP-Injector, a drop-in, protocol-aware fault-injection middleware that interposes on the MCP tool-call path with controlled persistence (permanent, transient, intermittent) and seedable schedules. Its fault model is calibrated to the observed incident distribution (failure mode x persistence) of the public MCP ecosystem, mined from 57,240 issue and pull-request threads across 1,774 open-source MCP repositories. In a 1,350-cell experiment crossing two backbone sizes (20B, 120B), three agent stacks (custom multi-round plan-and-execute, OpenAI Agents SDK, LangChain), and three fault injection conditions, we find that faults drawn from this permanent-heavy stress profile cause severe quality degradation (task-completion score falls by 60%, from 8.08 to 3.23 out of 10), and that scale does not purchase fault tolerance for the two gpt-oss backbones we test: the 120B retains no larger share of its fault-free score under faults (resilience-ratio model, p = 0.96), and its completion rate under faults is, if anything, lower (91.1% vs. 95.6%; difference 4.4 points, 95% CI [-0.2, 9.3]). Agent stacks differ in how well they absorb faults, which suggests that framework-level error handling matters more than model scale. These results demonstrate that capability benchmarks alone can mask operational brittleness, motivating protocol-aware fault injection as a complementary evaluation dimension for tool-calling agents.

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arXiv AI Papers

IGG: A Benchmark for Interactive GUI Grounding under Visibility Constraints

GUI grounding benchmarks ask whether an agent can localize a target that is already visible in a static screenshot. Real interfaces often violate this assumption: a target may be off-screen, appear only after a state change or hover, remain occluded, or become actionable after a delay. This leaves the ability to recover target visibility unevaluated. To measure this reveal step, we introduce Interactive GUI Grounding (IGG), a benchmark in which an agent must first make the target visible through interaction and then click it. IGG contains 601 tasks across 16 controllable GUI environments and seven visibility-constraint sub-types, with a compact action space of scrolling, moving, dragging, waiting, and clicking. In our human study, participants achieve 94.6% accuracy, while GPT-5.5 reaches 79.4% and the strongest evaluated open-source VLM reaches only 31.6%. To identify the source of this gap, we conduct two controlled interventions. Telling Qwen3-VL which interaction to perform raises its accuracy only from 30.8% to 33.9%, whereas performing the interaction for the model raises it to 81.9%. The bottleneck is executing the reveal interaction, not recognizing the target once it is exposed. We further show that this capability is learnable, demonstrating that visibility recovery can be strengthened consistently across model families.

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arXiv AI Papers

When Agents Fail: Model or Harness--Who's to Blame?

LLM agents combine models with execution harnesses, so agentic benchmark performance reflects their joint behavior. We argue that harnesses should therefore be evaluated through their interactions with underlying models. We develop a framework combining five complementary measures: (i) Valid Completion Rate (VCR), how reliably agents finish normally and deliver evaluable results, irrespective of task correctness; (ii) Model-Harness Fit, how well a harness supports task achievement through valid completion for a given model; (iii) Cross-Model Fit, a harness's overall suitability across evaluated models; (iv) Interaction Residuals, pairing-specific execution strengths and weaknesses hidden by component-level summaries; and (v) Token Load, the token demands of agent execution, including failed attempts. We evaluate four general-purpose harnesses (OpenCode, Codex CLI, Pi CLI, and DeepAgents) with four core models, plus two fixed native model-harness systems, on six benchmarks covering context management, tool use, long-context planning, multimodal interaction, and artifact handoff. Including native references and stress conditions, 111 evaluation settings yield 52,168 trajectories. Harness rankings vary across models and benchmarks; task performance and valid completion can favor different pairings, and similar task scores can accompany distinct execution profiles. OpenCode ranks first in cross-model performance, while DeepSeek V4 Flash Preview maintains consistently high Mean VCR across harnesses on the shared four-benchmark panel. These findings support evaluating model-harness interactions, training transferable harness-use capabilities in models, and harness designs adapted to the model and task.

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arXiv AI Papers

CASE: Confusion-Aware Skill Evolution for Frozen Multimodal Emotion Models

Multimodal large language models (MLLMs) have substantially advanced Multimodal Emotion Recognition (MER) by enabling fine-grained emotion understanding through reasoning over multimodal evidence. However, they still exhibit systematic confusion between semantically adjacent emotions with highly overlapping multimodal cues. Existing approaches typically address these errors through global parameter adaptation, making confusion correction costly and inflexible. We instead observe that emotion confusion is highly localized and therefore better addressed through reusable pair-specific expertise. Building on this insight, we propose Confusion-Aware Skill Evolution (CASE), the first agent-skill framework for MER. CASE maintains a sparse, self-evolving library of pair-specific EmotionSkills that externalize affective expertise from model parameters, enabling the learned expertise to be continuously refined and readily transferred across diverse frozen MLLM backbones. During inference, CASE dynamically retrieves the appropriate EmotionSkill to reinforce boundary-aware reasoning while keeping the MLLM backbone frozen. Extensive experiments on CA-MER, DFEW, and EMER demonstrate the effectiveness and transferability of CASE across both general-purpose and emotion-specialized MLLMs. Notably, CASE improves the average accuracy of Qwen3-VL-8B on the CA-MER benchmark from 46.80% to 59.13%, while achieving consistent gains across MLLMs.

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arXiv AI Papers

CauProphet: Teaching Agents to Develop Causal Cognition like Humans

Large language model (LLM) agents increasingly support long-horizon tasks by leveraging external memory and past experience. However, existing agents mainly retrieve records or summaries, lacking the ability to form and refine causal understanding of the world. Inspired by human causal cognition, we introduce CauProphet, an agent that develops and updates causal knowledge within its Causal Cognition. For each task, CauProphet combines relevant knowledge in Causal Cognition with current evidence to construct a Causal Belief, a structured belief capturing causal factors and the effects of possible actions. It uses this belief for decision-making and continuously updates both the belief and Causal Cognition as new observations emerge, enabling causal knowledge that persists beyond individual experiences. Evaluations demonstrate that CauProphet progressively acquires causal knowledge and transfers it to future decision-making. In financial research, CauProphet leverages prior discoveries to improve downstream analyses and outperforms all baselines in mean rank correlation with next-day returns, achieving a 25.4% improvement over a baseline agent. It also improves prediction accuracy from 21.3% to 28.6% in dynamic real-world settings. Further experiments validate its ability to perform reliable causal analysis and action selection across scientific and everyday tasks, demonstrating the potential of causal experience learning for next-generation LLM agents.

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arXiv AI Papers

Beyond Copying: Lifelong Smart Contract Security Task Construction via Protocol Mutation

AI agents can inspect code and run tests to support smart contract security. SlowMist reports about $38.6 billion in losses across the broader blockchain ecosystem. Existing evaluations can reward memorized or copied answers, including attack code recovered from public blockchain transactions. Reconstructing contracts and validating tasks also require costly manual effort. To address these issues, we propose CONSTRAINTDIAL, a framework for lifelong construction of smart contract security tasks via protocol mutation. It automates local contract reconstruction and uses attack execution to select changes to the required calls or inputs. Execution checks guide revisions that make the original attack fail while preserving exploitability, the security objective, and normal functionality. New incidents and audit findings enter the same procedure. With CONSTRAINTDIAL, we construct 3,045 task inputs from 203 public cases, covering detect, exploit, and patch. Compared with reconstruction alone, protocol mutation reduces success with supplied public answers by 10.9 percentage points on average across detect, exploit, and patch. The fraction of tasks solved by copying online answers falls by 9.3 points.

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arXiv AI Papers

POSEIDON: Scaling Training Environments for Scientific Agents from Code Repositories

Training environments remain a major bottleneck for agents in data-driven scientific discovery. Existing collections of executable and verifiable training environments are small, and their construction remains difficult to scale. To address this limitation, we introduce Poseidon, an automated pipeline for generating diverse, verifiable training environments from scientific code repositories at scale. From the same repository budget, Poseidon extracts nearly 10 times as many training environments as a prior approach by decomposing scientific workflows into four complementary task types: Reproduction, Subflow, Completion, and Correction, where each type targets a distinct capability for scientific research. A recursive improvement loop further refines failed candidates and recovers otherwise discarded environments. Using Poseidon, we construct Pearl, a collection of 97,659 executable and verifiable environments from 7,110 public repositories spanning 10 scientific disciplines. To the best of our knowledge, Pearl is the largest and most broadly multidisciplinary collection of scientific-agent training environments to date. Qwen3.5 models (9B, 27B, and 35B-A3B) trained on Pearl achieve consistent gains across six challenging scientific-agent benchmarks. Overall, the scale and diversity of Pearl offer opportunities for training scientific discovery agents.

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arXiv AI Papers

Decoupling Patient Personas and Clinical Workflows: A Dual-Agent Approach to Realistic Medical Dialogue Generation

Pre-consultation medical dialogues are essential for collecting comprehensive patient information, but are costly to obtain at scale due to privacy and ethical constraints. Existing LLM-based synthesis methods often rely on prompt engineering or rigid rules, limiting their ability to balance clinical relevance with realistic patient diversity. We propose CoRPS-Dial, a controllable dual-agent framework for pre-consultation medical dialogue synthesis that integrates patient personas with guideline-aligned clinical workflow rules. CoRPS-Dial generates dialogues through interactions between a persona-driven patient agent and a process-guided doctor agent, followed by post-hoc quality control for role consistency, workflow completeness, and textual consistency. Experiments on coronary heart disease demonstrate that CoRPS-Dial improves alignment between synthetic and real dialogues in information coverage, clinical compliance, and dialogue naturalness. Downstream fine-tuning experiments further confirm the utility of the generated synthetic data for medical dialogue tasks. These results highlight the effectiveness of CoRPS-Dial for clinically grounded and controllable medical dialogue synthesis.

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arXiv AI Papers

SCI-AGENT-EXAM: Benchmarking Agents on Scientific Research Tasks

Large language model (LLM) agents are increasingly capable of supporting scientific workflows, but their capabilities across diverse research activities remain difficult to assess systematically. Existing benchmarks often focus on selected scientific capabilities or task types, limiting a comprehensive characterization of scientific agents' strengths and weaknesses in realistic research workflows. We introduce SCI-AGENT-EXAM, a workflow-oriented benchmark comprising 120 expert-curated tasks across 11 scientific fields and 7 research task types defined by the Scientific Workflow Task Taxonomy (SWTT). Each task requires both executable artifacts (e.g., code and scripts) and textual artifacts (e.g., reports and explanations). To evaluate the heterogeneous task outputs, we develop a hybrid evaluation protocol combining deterministic programmatic verification for executable artifacts with a calibrated, expert-validated LLM-based judge for textual artifacts. Beyond outcome assessment, we analyze progress and solution stability along execution trajectories to characterize how agents reach their final results. Experiments with 10 frontier LLM agents reveal substantial performance gaps: GPT-6 Astra achieves the highest overall score of 80.9, yet only 26.0% of its runs exceed the 0.95 success threshold. Further analyses uncover distinct capability profiles across scientific task types and substantial variation in execution efficiency and stability. Our code and data are available at https://github.com/SKYLENAGE-AI/Sci-Agent-Exam.

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